ClickHouse

SkillDatabases & data

Lets your agent query ClickHouse databases, run Goose migrations, and set up test schemas or telemetry storage.

Available today. Use it from your connected AI after setup.

Connect ahel once, and every AI you use reads what you have installed.

Then ask your AI: use the ClickHouse skill

About this capability

ClickHouse queries, Goose migrations, chdb test schema, or telemetry storage paths.

What this skill tells your AI

The instructions your AI receives, as published by latitude-dev/latitude-llm in .agents/skills/database-clickhouse/SKILL.md and read by ahel’s review.

When to use: ClickHouse queries, Goose migrations, chdb test schema, or telemetry storage paths.

ClickHouse queries

ClickHouse adapter stack remains SQL-oriented in packages/platform/db-clickhouse.

All ClickHouse queries must use parameterized bindings ({name:Type} syntax with query_params) — never interpolate user-supplied values directly into SQL strings.

ClickHouse migrations (Goose)

Install goose (if not already installed):

brew install goose

Migration files live in packages/platform/db-clickhouse/clickhouse/migrations/:

  • unclustered/ — single-node deployments (local dev, default)
  • clustered/ — distributed deployments (LAT_CLICKHOUSE_CLUSTER_ENABLED=true)

Goose tracks applied migrations automatically in the goose_db_version table. The repo also keeps packages/platform/db-clickhouse/clickhouse/.migration-lock, regenerated by ch:create, solely to force git conflicts when developers create migrations in parallel.

Migration execution safety (agents)

Same rule as Postgres: do not run ch:* or ch:schema:dump unless the user explicitly asked in this conversation.

Commands (run from repo root):

# Apply all pending migrations
pnpm --filter @platform/db-clickhouse ch:up

# Roll back last migration
pnpm --filter @platform/db-clickhouse ch:down

# Show migration status
pnpm --filter @platform/db-clickhouse ch:status

# Create a new migration (creates the next sequential file in both unclustered/ and clustered/)
pnpm --filter @platform/db-clickhouse ch:create <migration_name>

# Roll back ALL migrations (equivalent to drop)
pnpm --filter @platform/db-clickhouse ch:drop

# Reset ClickHouse volume and re-migrate (nuclear option)
pnpm --filter @platform/db-clickhouse ch:reset

# Seed sample span data
pnpm --filter @platform/db-clickhouse ch:seed

Creating migrations

  1. ch:create <name> — creates the next sequential migration (for example 00016_name.sql) in both unclustered/ and clustered/, and updates clickhouse/.migration-lock
  2. Fill in both files (see rules below)
  3. Commit both migration files plus clickhouse/.migration-lock

Migration file rules

  • Each migration is a single .sql file with -- +goose Up and -- +goose Down sections
  • Always include -- +goose NO TRANSACTION (ClickHouse does not support transactions)
  • ClickHouse migration history is append-only in this repository. Do not edit existing Goose migration files; add a new migration in both unclustered/ and clustered/ instead.
  • For additive changes to existing tables, prefer ordinary ALTER TABLE or additive projection migrations with sensible defaults unless the change truly requires a table rebuild.
  • unclustered/: use standard table engines (e.g. ReplacingMergeTree)
  • clustered/: add ON CLUSTER default and use Replicated* engines

Clustered migration reliability (replica lag / Code 517)

In clustered ClickHouse, replicas can temporarily lag DDL metadata propagation. A migration can fail with:

  • code: 517
  • Code: 517
  • doesn't catchup with latest ALTER query updates

Use these authoring rules to reduce failures:

  • Keep migrations idempotent (IF EXISTS / IF NOT EXISTS) so retries are safe.
  • Prefer additive schema changes over destructive rewrites.
  • Keep DDL batches small; avoid chaining many dependent ALTER statements in one migration.
  • For tightly-coupled changes on the same table in replicated clusters, prefer one ALTER TABLE ... with multiple actions over multiple dependent ALTER statements.
  • If statement B depends on metadata introduced by statement A, prefer splitting them into separate migration files.
  • Avoid coupling view rebuilds and many base-table changes in one large migration when possible.
  • Run one migration runner per environment (never concurrent ch:up against the same cluster).

Execution safety:

  • packages/platform/db-clickhouse/clickhouse/scripts/up.sh retries transient replica lag errors from goose ... up.
  • In clustered mode, migration sessions set alter_sync, distributed_ddl_task_timeout, and replication_wait_for_inactive_replica_timeout to improve DDL convergence.
  • Retry tuning env vars:
    • LAT_CLICKHOUSE_MIGRATION_MAX_RETRIES (default 20)
    • LAT_CLICKHOUSE_MIGRATION_RETRY_DELAY_SECONDS (default 5)
    • LAT_CLICKHOUSE_MIGRATION_MAX_RETRY_DELAY_SECONDS (default 30)
  • Clustered DDL tuning env vars:
    • LAT_CLICKHOUSE_MIGRATION_ALTER_SYNC (default 2)
    • LAT_CLICKHOUSE_MIGRATION_DISTRIBUTED_DDL_TASK_TIMEOUT_SECONDS (default 300)
    • LAT_CLICKHOUSE_MIGRATION_REPLICA_WAIT_TIMEOUT_SECONDS (default 300)

Signals

GitHub stars
5k
Forks
387
Last commit
Sep 2026
Advanced
Catalog kind
skill
Gateway key
database-clickhouse-weaviate
Source
github.com/latitude-dev/latitude-llm