MetaPhlAn Profiler Skill

SkillDev tools

MetaPhlAn metagenomic profiling skill for species-level community composition

Use MetaPhlAn Profiler Skill in Claude, ChatGPT or Ahel Desktop

Free. Sign in, add MetaPhlAn Profiler Skill and connect your AI. About a minute.

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Also: Claude Code · Cursor · Codex

Then ask your AI: use the MetaPhlAn Profiler Skill

Details

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Account requirements not reviewed. Check the skill instructions before use; Ahel provides instructions and does not run this skill.

No other account needed.

Add Ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

MetaPhlAn Profiler SkillStart free

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/bioinformatics/skills/metaphlan-profiler/SKILL.md and read by Ahel’s review.

Purpose

Enable MetaPhlAn metagenomic profiling for species-level community composition.

Capabilities

Clade-specific marker gene analysis
Species-level quantification
Strain-level profiling (StrainPhlAn)
Unknown species estimation
Multi-sample heatmaps
Comparative analysis

Usage Guidelines

Use latest marker database
Profile at species level for most analyses
Apply strain-level analysis when relevant
Visualize community composition
Compare across samples and conditions
Document database versions

Dependencies

MetaPhlAn4
StrainPhlAn
mOTUs

Process Integration

Shotgun Metagenomics Pipeline (shotgun-metagenomics)

Signals

GitHub stars: 2k
Forks: 113
Last commit: Sep 2026

Advanced

Item type: skill
Key: metaphlan-profiler
Source: github.com/a5c-ai/babysitter

github.com/a5c-ai/babysitter